i'm about as much a newbie as you, ray, but i do have 1 qt running, so let me try to answer your q's. i'm sure one of the more experienced people will chime in too.
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Originally Posted by ray
doesn't that tank have to cycle just like my big one did? so if i set one up now i will have to cycle it before I'm able to put a fish into it to quarantine for a few weeks before i put it in my tank?
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yes, it does need to be cycled. for my very first qt, i used bio-spira to speed it up and since b-s needs fish anyways, i was able to put my fish in there also. there are other options such as getting gravel/filter media from an established tank, but as newbies, we wouldn't have that. you can also try the LFS and ask for some, but people advise against it because there might be disease there.
i'm setting up a 2nd qt right now and what i'm doing is adding a power filter onto my main tank to soak up bacteria in the filter media for a week. then i will fill the qt with main tank water so it will have the bacteria and be cycled already.
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Originally Posted by ray
and what happens after that? do i clean it out just in case? do i keep it running? cause it seems like it would have to re-cycle every time i want to use it unless i just kept it going... and unless i maybe have a few things in it to keep the ammonias going... or feed it every now and again or something...
is there something I'm missing here?
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the water can be dumped out, but i will put the filters back onto my main tank or at least find some way for the filter media to be incorporated into the main tank so it will keep the bacteria in the media alive. when i need to set up the qt again, just pull the media and use water from the main tank.
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Originally Posted by ray
i know i want to use water from my main tank but will that really acclimate the fish? if the water is from my main tank but the fish has to be in the QT for three weeks or whatever won't the two tanks have completely different chemistry's by then maybe?
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qt isn't for acclimating fish. after a long, confusing trip from where ever the fish came from, it is being prepared to be moved into a permanent home. the purpose of the qt is to let the fish get use to having a home. it can slowly learn to eat the food you're feeding and get use to a calm captive environment without having to compete with other fish. and of course, the main purpose of the qt is to watch it for disease before it spreads the disease to your main tank. when it is time to move into your main tank, you'll have to acclimate it to your main water.
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Originally Posted by ray
also i am wondering if i need to put my first fish in the QT or can they just go straight in the main tank?
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some people qt their first fish, some don't. it is a better idea to do so because with your main tank, you'll have live rock, equipment, substrate, decorations, etc. if you fish does get sick in your main tank, just think about how hard it would be to catch it with so many hiding places for it. if you decide to treat it in your main tank, you'll have to realize that a 55g tank will need more medication per water volume than a 10g qt.
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Originally Posted by ray
do you have to quarantine invertebrates? snails crabs etc?
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it's a good idea as well. everything can carry disease, but i've heard inverts are less prone to it.
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Originally Posted by ray
i know my QT doesn't have to have live rock etc... but is it better for it to?
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i don't really know a reason why we don't put LR into the qt. for hiding places, everyone uses pvc pipes and flower pots.
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Originally Posted by ray
would it be horrible for me to try and grow stuff in my QT when it isn't being used? ex: macro Algae...
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you can think of the qt as an extra tank, but let's say you have algae growing in your qt and suddenly you have a medical emergency. how will you clear out the qt immediately? it's better to have a back-up empty tank.
and for algae, would that be a refugium? that would be connected to your main and the qt should never be conencted to your main.
hope this helps!! i'm learning along with you!