Capitol Aquarium - Downtown Sacramento
This is by far one of the most impressive stores I've ever seen, and has been in the sacramento area for a long time. They have some great staff (and some poor staff), and great selection of fresh and marine fish. They also have a good selection of books. A bit on the pricey side, but a good resource. They also have a wonderful Koi pond in the front of the store - for a quarter you can buy food and feed the fish!
Fish Planet - Howe bout arden center, Sacramento

Relatively new, this is a huge store in a great retail based area. The stafff is incredibly friendly, and there is always someone around to help you out or answer a question. They have a kids area with books and toys, and a huge showpiece tank in the center of the store with beautiful sharks. There is a great selection of fish, plants, tanks (including the zero edge hex of my dreams) medicine, foods, etc. The prices are very reasonable.